Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs17047733 chr2:118841325 T/C 0.000186 109 19.28 7.15 1 KM Plot
LAML rs17078796 chr13:24043830 A/G 1.06E-7 111 1 20.27 13.2 KM Plot
LAML rs17149653 chr10:11195342 A/G 4.49E-5 111 15.7 13.1 0.52 KM Plot
LAML rs17154599 chr8:8551418 C/T 5.25E-5 111 15.23 16.27 4.08 KM Plot
LAML rs17168529 chr7:135645603 A/G 7.36E-5 111 13.15 28.93 0 KM Plot
LAML rs17172655 chr7:46228818 C/A 6.55E-5 110 15.17 13.73 0 KM Plot
LAML rs17172656 chr7:46230860 T/C 6.55E-5 110 15.17 13.73 0 KM Plot
LAML rs17172663 chr7:46237861 C/G 0.000118 111 0 9.63 15.7 KM Plot
LAML rs17182651 chr17:30547537 G/A 4.34E-5 111 14.67 15.23 0.52 KM Plot
LAML rs17274634 chr1:114217527 A/G 0.000184 111 13.1 20.28 5.6 KM Plot
LAML rs17452263 chr7:19750541 A/G 0.000134 110 15.7 11.13 0 KM Plot
LAML rs17462614 chr1:114319513 C/T 6.99E-5 110 13.1 21.8 5.1 KM Plot
LAML rs17469514 chr19:12549719 A/C 1.87E-5 111 6.13 22.37 13.1 KM Plot
LAML rs17621899 chr2:19952635 A/T 2.21E-12 111 17.78 14.13 0 KM Plot
LAML rs17658063 chr17:39564867 A/G 0.000107 111 14.22 17.2 0 KM Plot